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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
RRBS
Assay category
43
DNA binding
4
DNA accessibility
1
DNA methylation
Target of assay
27
histone
27
histone modification
17
narrow histone mark
16
control
10
broad histone mark
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
September, 2020
48
February, 2021
48
July, 2018
45
August, 2017
43
April, 2018
31
July, 2019
31
June, 2019
30
October, 2019
8
January, 2021
7
August, 2020
5
December, 2019
5
May, 2019
5
November, 2020
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
November, 2017
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
67
bam
67
fastq
55
bigWig
39
bed narrowPeak
25
bigBed narrowPeak
bed broadPeak
20
bigBed broadPeak
12
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
48
Homo sapiens
Biosample type
334
tissue
257
cell line
67
in vitro differentiated cells
48
primary cell
Organ
41
pancreas
31
epithelium
3
brain
2
vasculature
1
blood vessel
Project
48
AMP
Genome assembly (visualization)
36
hg19
30
GRCh38
Lab
48
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
48 results
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ChIP-seq
ATAC-seq
DNase-seq
RRBS
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
skeletal muscle myoblast
2
1
1
astrocyte of the cerebellum
1
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