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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
ChIP-seq
Assay category
98
DNA binding
Target of assay
242
transcription factor
227
histone modification
226
histone
127
broad histone mark
121
control
98
narrow histone mark
66
recombinant protein
36
RNA binding protein
13
chromatin remodeller
1
other context
1
other post-translational modification
Date released
141
October, 2019
73
August, 2017
64
May, 2021
34
May, 2019
27
May, 2020
25
November, 2017
23
April, 2019
16
December, 2017
15
May, 2024
15
September, 2018
11
August, 2021
11
June, 2019
11
October, 2018
8
February, 2018
4
November, 2019
3
January, 2019
3
March, 2020
1
October, 2017
Available data
90
bigWig
81
bam
79
bed narrowPeak
62
fastq
55
tagAlign
40
bigBed narrowPeak
bed broadPeak
14
bigBed broadPeak
6
bed bed3+
Organism
98
Homo sapiens
Biosample type
64
tissue
17
primary cell
16
in vitro differentiated cells
1
cell line
Organ
30
pancreas
27
connective tissue
24
brain
14
liver
11
adipose tissue
8
epithelium
2
musculature of body
Project
98
AMP
Genome assembly (visualization)
62
GRCh38
46
hg19
Lab
98
AMP-T2D consortium
Audit category:
12
missing controlled_by
Audit category:
7
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ChIP-seq
tissue
liver
13
islet of Langerhans
12
subcutaneous abdominal adipose tissue
10
layer of hippocampus
7
caudate nucleus
4
+ See 7 more…
primary cell
pancreatic endocrine cell
8
pancreatic alpha cell
4
pancreatic beta cell
4
skeletal muscle myoblast
1
in vitro differentiated cells
adipocyte
16
cell line
HepG2
1
See all biosamples
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