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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
249
ChIP-seq
5
ATAC-seq
Assay category
249
DNA binding
5
DNA accessibility
Target of assay
193
transcription factor
66
recombinant protein
53
histone
53
histone modification
36
broad histone mark
28
RNA binding protein
17
narrow histone mark
11
chromatin remodeller
1
other context
1
other post-translational modification
Date released
249
November, 2017
182
October, 2019
133
May, 2021
106
August, 2021
101
August, 2017
97
May, 2019
72
December, 2017
65
April, 2019
65
February, 2023
64
November, 2018
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
23
June, 2019
21
January, 2019
16
February, 2018
9
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
1
November, 2020
Available data
403
bam
339
bigWig
335
fastq
318
bed narrowPeak
317
bigBed narrowPeak
78
tagAlign
bed broadPeak
64
bigBed broadPeak
3
tar
2
bed bed3+
Organism
254
Homo sapiens
Biosample type
197
cell line
52
tissue
5
primary cell
Organ
197
liver
52
brain
5
epithelium
5
pancreas
Project
254
AMP
Genome assembly (visualization)
230
GRCh38
200
hg19
Lab
254
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
254 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
197
tissue
layer of hippocampus
16
caudate nucleus
11
substantia nigra
10
middle frontal area 46
9
cingulate gyrus
5
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primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
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