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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
371
ChIP-seq
Assay category
371
DNA binding
Target of assay
233
transcription factor
71
control
65
recombinant protein
64
histone
64
histone modification
40
broad histone mark
32
RNA binding protein
24
narrow histone mark
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
572
February, 2021
371
November, 2017
283
May, 2020
277
May, 2021
266
August, 2017
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
83
December, 2017
82
July, 2019
82
November, 2018
79
April, 2019
75
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
37
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
371
bam
313
bigWig
303
fastq
294
bed narrowPeak
293
bigBed narrowPeak
67
tagAlign
57
bed broadPeak
51
bigBed broadPeak
3
tar
Organism
371
Homo sapiens
Biosample type
293
cell line
69
tissue
9
primary cell
Organ
293
liver
78
brain
6
epithelium
6
vasculature
3
blood vessel
Project
371
AMP
Genome assembly (visualization)
263
GRCh38
259
hg19
Lab
371
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
371 results
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Clear Filters
ChIP-seq
cell line
HepG2
293
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
cingulate gyrus
8
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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