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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ChIP-seq
Assay category
112
DNA binding
Target of assay
71
control
39
transcription factor
6
RNA binding protein
2
chromatin remodeller
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
Date released
112
November, 2017
76
May, 2020
46
October, 2019
33
August, 2017
29
October, 2018
24
May, 2019
24
May, 2022
17
December, 2017
15
April, 2019
8
August, 2021
8
February, 2018
8
June, 2019
8
November, 2018
4
December, 2018
4
February, 2021
4
January, 2019
4
September, 2017
3
July, 2019
2
November, 2019
2
October, 2017
1
March, 2019
1
May, 2021
Available data
112
bam
101
fastq
55
bigWig
33
bed narrowPeak
32
bigBed narrowPeak
24
tagAlign
15
bed broadPeak
14
bigBed broadPeak
3
tar
Organism
112
Homo sapiens
Biosample type
97
cell line
12
tissue
3
primary cell
Organ
97
liver
15
brain
2
epithelium
2
vasculature
1
blood vessel
Project
112
AMP
Genome assembly (visualization)
GRCh38
280
hg19
Lab
112
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
4
inconsistent control read length
2
inconsistent control run_type
month_released!
December, 2019
assembly!
GRCh38
BIOSAMPLE
ASSAY
112 results
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Clear Filters
ChIP-seq
cell line
HepG2
97
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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