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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
328
ChIP-seq
Assay category
328
DNA binding
Target of assay
196
transcription factor
71
control
66
recombinant protein
58
histone
58
histone modification
38
broad histone mark
30
RNA binding protein
20
narrow histone mark
11
chromatin remodeller
1
other context
1
other post-translational modification
Date released
572
February, 2021
328
November, 2017
283
May, 2020
277
May, 2021
267
August, 2017
241
October, 2019
164
July, 2018
120
May, 2019
94
December, 2017
82
July, 2019
79
April, 2019
78
November, 2018
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
31
June, 2019
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
March, 2019
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
bigBed broadPeak
3
tar
Organism
328
Homo sapiens
Biosample type
256
cell line
69
tissue
3
primary cell
Organ
256
liver
72
brain
2
epithelium
2
vasculature
1
blood vessel
Project
328
AMP
Genome assembly (visualization)
230
GRCh38
216
hg19
Lab
328
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
month_released!
March, 2019
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
328 results
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Clear Filters
ChIP-seq
cell line
HepG2
256
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
cingulate gyrus
8
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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