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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
306
ChIP-seq
Assay category
306
DNA binding
Target of assay
240
transcription factor
66
recombinant protein
56
control
34
RNA binding protein
15
chromatin remodeller
15
histone
15
histone modification
broad histone mark
7
narrow histone mark
2
other context
2
other post-translational modification
Date released
306
November, 2017
193
May, 2020
53
December, 2017
53
November, 2018
19
August, 2017
7
July, 2019
5
December, 2019
5
January, 2019
4
October, 2019
3
August, 2021
2
June, 2019
1
February, 2021
1
March, 2020
Available data
307
fastq
306
bam
260
bigWig
242
bed narrowPeak
242
bigBed narrowPeak
50
bed broadPeak
50
bigBed broadPeak
6
tagAlign
3
tar
Organism
306
Homo sapiens
Biosample type
306
cell line
Organ
306
liver
40
brain
6
epithelium
6
vasculature
3
blood vessel
Project
306
AMP
Genome assembly (visualization)
258
hg19
210
GRCh38
Lab
306
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
15
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
306 results
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ChIP-seq
cell line
HepG2
306
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