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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
317
ChIP-seq
Assay category
317
DNA binding
Target of assay
243
transcription factor
histone
75
histone modification
71
control
66
recombinant protein
46
broad histone mark
37
RNA binding protein
29
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
317
November, 2017
79
August, 2017
70
November, 2018
63
December, 2017
46
October, 2019
44
October, 2018
34
December, 2018
28
May, 2019
23
May, 2020
20
April, 2019
18
January, 2019
12
June, 2019
8
August, 2021
8
February, 2018
8
February, 2021
6
September, 2017
5
May, 2021
3
November, 2019
2
October, 2017
Available data
317
bam
306
fastq
259
bigWig
239
bed narrowPeak
239
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
11
tagAlign
3
tar
Organism
317
Homo sapiens
Biosample type
299
cell line
12
tissue
6
primary cell
Organ
299
liver
18
brain
4
epithelium
4
vasculature
2
blood vessel
Project
317
AMP
Genome assembly (visualization)
257
hg19
207
GRCh38
Lab
317
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
histone
BIOSAMPLE
ASSAY
317 results
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Clear Filters
ChIP-seq
cell line
HepG2
299
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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