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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
305
ChIP-seq
Assay category
305
DNA binding
Target of assay
243
transcription factor
66
recombinant protein
59
control
37
RNA binding protein
histone
18
histone modification
15
chromatin remodeller
10
narrow histone mark
8
broad histone mark
2
other context
2
other post-translational modification
Date released
305
November, 2017
153
May, 2021
120
February, 2021
90
May, 2020
61
November, 2018
49
August, 2017
48
July, 2018
43
April, 2018
40
September, 2018
36
June, 2019
36
October, 2019
33
August, 2021
27
December, 2018
23
February, 2018
22
January, 2019
20
December, 2017
18
July, 2019
10
November, 2019
6
March, 2020
6
November, 2020
5
December, 2019
5
September, 2017
3
August, 2018
3
June, 2018
2
May, 2019
2
October, 2018
Available data
306
fastq
305
bam
259
bigWig
239
bed narrowPeak
239
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
3
tar
1
tagAlign
Organism
305
Homo sapiens
Biosample type
299
cell line
tissue
6
primary cell
Organ
299
liver
6
brain
4
epithelium
4
vasculature
2
blood vessel
Project
305
AMP
Genome assembly (visualization)
257
hg19
207
GRCh38
Lab
305
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
histone
biosample_type!
tissue
BIOSAMPLE
ASSAY
305 results
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Clear Filters
ChIP-seq
cell line
HepG2
299
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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