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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
323
ChIP-seq
5
ATAC-seq
Assay category
323
DNA binding
5
DNA accessibility
Target of assay
243
transcription factor
77
control
histone
75
histone modification
66
recombinant protein
46
broad histone mark
37
RNA binding protein
29
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
572
February, 2021
317
November, 2017
256
May, 2020
199
June, 2019
191
May, 2021
180
August, 2017
164
July, 2018
87
November, 2018
82
July, 2019
77
October, 2019
63
December, 2017
49
April, 2018
49
November, 2019
46
October, 2018
40
September, 2018
34
December, 2018
33
August, 2021
28
May, 2019
24
May, 2022
23
February, 2018
23
January, 2019
20
April, 2019
13
March, 2020
11
September, 2017
9
October, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
328
bam
317
fastq
264
bigWig
244
bed narrowPeak
244
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
11
tagAlign
3
tar
2
bed bed3+
Organism
328
Homo sapiens
Biosample type
299
cell line
18
tissue
11
primary cell
Organ
299
liver
18
brain
11
pancreas
9
epithelium
4
vasculature
2
blood vessel
Project
328
AMP
Genome assembly (visualization)
264
hg19
214
GRCh38
Lab
328
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
histone
BIOSAMPLE
ASSAY
328 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
299
tissue
islet of Langerhans
6
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
+ See 2 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
+ See 1 more…
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