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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
317
ChIP-seq
Assay category
317
DNA binding
Target of assay
243
transcription factor
histone
75
histone modification
71
control
66
recombinant protein
46
broad histone mark
37
RNA binding protein
29
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
572
February, 2021
317
November, 2017
256
May, 2020
199
June, 2019
191
May, 2021
180
August, 2017
164
July, 2018
87
November, 2018
82
July, 2019
77
October, 2019
63
December, 2017
49
April, 2018
49
November, 2019
46
October, 2018
40
September, 2018
34
December, 2018
33
August, 2021
28
May, 2019
24
May, 2022
23
February, 2018
23
January, 2019
20
April, 2019
13
March, 2020
11
September, 2017
9
October, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
317
bam
306
fastq
259
bigWig
239
bed narrowPeak
239
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
11
tagAlign
3
tar
Organism
317
Homo sapiens
Biosample type
299
cell line
12
tissue
6
primary cell
Organ
299
liver
18
brain
4
epithelium
4
vasculature
2
blood vessel
Project
317
AMP
Genome assembly (visualization)
257
hg19
207
GRCh38
Lab
317
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
histone
BIOSAMPLE
ASSAY
317 results
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Clear Filters
ChIP-seq
cell line
HepG2
299
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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