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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
284
ChIP-seq
Assay category
284
DNA binding
Target of assay
236
transcription factor
74
histone
74
histone modification
66
recombinant protein
45
broad histone mark
35
RNA binding protein
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
284
November, 2017
199
June, 2019
95
August, 2021
92
August, 2017
81
May, 2021
73
November, 2018
72
October, 2019
65
February, 2023
63
May, 2019
57
December, 2017
42
April, 2019
38
May, 2022
34
October, 2018
33
November, 2019
31
September, 2018
30
December, 2018
25
May, 2024
23
February, 2021
18
January, 2019
11
October, 2017
8
February, 2018
7
July, 2019
5
September, 2017
2
November, 2020
Available data
363
bam
314
fastq
304
bigWig
284
bed narrowPeak
284
bigBed narrowPeak
57
bed broadPeak
55
bigBed broadPeak
52
tagAlign
3
tar
Organism
284
Homo sapiens
Biosample type
243
cell line
38
tissue
3
primary cell
Organ
243
liver
41
brain
2
epithelium
2
vasculature
1
blood vessel
Project
284
AMP
Genome assembly (visualization)
252
GRCh38
246
hg19
Lab
284
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
15
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
284 results
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Clear Filters
ChIP-seq
cell line
HepG2
243
tissue
layer of hippocampus
10
caudate nucleus
8
substantia nigra
8
middle frontal area 46
7
cingulate gyrus
5
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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