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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
101
ChIP-seq
Assay category
101
DNA binding
Target of assay
59
control
40
transcription factor
6
RNA binding protein
2
chromatin remodeller
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
Date released
101
November, 2017
76
February, 2023
45
February, 2021
38
August, 2017
38
September, 2020
27
October, 2018
24
May, 2022
17
December, 2017
9
November, 2018
8
February, 2018
5
December, 2018
5
January, 2018
4
January, 2019
4
September, 2017
3
October, 2017
1
August, 2018
1
March, 2019
1
September, 2018
Available data
112
bam
101
fastq
55
bigWig
33
bed narrowPeak
32
bigBed narrowPeak
24
tagAlign
15
bed broadPeak
14
bigBed broadPeak
3
tar
Organism
101
Homo sapiens
Biosample type
98
cell line
3
primary cell
Organ
98
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
101
AMP
Genome assembly (visualization)
275
hg19
GRCh38
Lab
101
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
4
inconsistent control read length
2
inconsistent control run_type
assembly!
GRCh38
BIOSAMPLE
ASSAY
101 results
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ChIP-seq
cell line
HepG2
98
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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