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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
1
ATAC-seq
Assay category
69
DNA binding
1
DNA accessibility
Target of assay
59
control
8
transcription factor
2
RNA binding protein
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
Date released
246
August, 2017
76
February, 2023
69
November, 2017
59
September, 2018
50
July, 2018
45
February, 2021
44
April, 2018
44
December, 2017
41
September, 2020
39
February, 2018
29
October, 2018
24
May, 2022
15
November, 2018
11
October, 2017
9
January, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
393
bam
334
bigWig
325
fastq
313
bed narrowPeak
bigBed narrowPeak
78
tagAlign
71
bed broadPeak
64
bigBed broadPeak
3
tar
1
bedpe
1
hic
Organism
70
Homo sapiens
Biosample type
66
cell line
3
primary cell
1
tissue
Organ
66
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
1
pancreas
Project
70
AMP
Genome assembly (visualization)
22
hg19
Lab
69
AMP-T2D consortium
1
Mark McCarthy, Oxford
Audit category:
2
inconsistent control read length
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
66
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
tissue
islet of Langerhans
1
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