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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
410
ChIP-seq
5
total RNA-seq
Assay category
410
DNA binding
5
Transcription
Target of assay
258
transcription factor
95
histone
95
histone modification
75
control
66
recombinant protein
54
broad histone mark
43
RNA binding protein
41
narrow histone mark
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
408
August, 2017
399
May, 2021
391
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
91
December, 2017
81
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
401
bam
339
bigWig
333
fastq
313
bed narrowPeak
312
bigBed narrowPeak
78
tagAlign
66
bed broadPeak
60
bigBed broadPeak
5
tsv
3
tar
Organism
415
Homo sapiens
Biosample type
317
cell line
89
tissue
9
primary cell
Organ
305
liver
91
brain
12
blood
12
bodily fluid
7
spleen
6
epithelium
6
vasculature
3
blood vessel
Project
415
AMP
Genome assembly (visualization)
287
GRCh38
286
hg19
Lab
415
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
15
inconsistent control read length
month_released!
December, 2018
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
415 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
300
5
GM12878
12
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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