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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
Assay category
94
DNA binding
Target of assay
255
transcription factor
94
histone
94
histone modification
76
control
66
recombinant protein
52
broad histone mark
42
narrow histone mark
38
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
196
October, 2019
162
August, 2017
119
May, 2021
92
May, 2019
88
November, 2017
60
April, 2019
35
May, 2024
32
September, 2018
30
October, 2018
27
May, 2020
19
June, 2019
12
October, 2017
10
November, 2019
7
December, 2017
7
January, 2019
6
August, 2021
3
March, 2020
Available data
81
bigWig
80
bed narrowPeak
78
bam
73
bigBed narrowPeak
70
tagAlign
23
bed broadPeak
18
fastq
17
bigBed broadPeak
3
bed bed3+
Organism
94
Homo sapiens
Biosample type
70
tissue
18
cell line
in vitro differentiated cells
6
primary cell
Organ
73
brain
21
liver
5
epithelium
2
vasculature
1
blood vessel
Project
94
AMP
Genome assembly (visualization)
76
GRCh38
30
hg19
Lab
91
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
94 results
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Clear Filters
ChIP-seq
tissue
layer of hippocampus
19
caudate nucleus
13
substantia nigra
13
cingulate gyrus
12
middle frontal area 46
12
+ See 1 more…
cell line
HepG2
18
primary cell
hepatocyte
3
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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