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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
Assay category
59
DNA binding
Target of assay
255
transcription factor
108
histone
108
histone modification
83
control
66
recombinant protein
59
broad histone mark
49
narrow histone mark
38
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
109
August, 2017
76
May, 2021
58
May, 2019
55
October, 2019
50
November, 2017
37
April, 2019
20
May, 2024
19
October, 2018
17
September, 2018
15
December, 2017
10
October, 2017
9
August, 2021
8
February, 2018
8
June, 2019
6
November, 2019
4
January, 2019
0
February, 2020
Available data
53
bam
53
bed narrowPeak
53
bigWig
48
tagAlign
45
bigBed narrowPeak
10
bed broadPeak
8
bigBed broadPeak
8
fastq
1
bed bed3+
Organism
59
Homo sapiens
Biosample type
42
tissue
9
cell line
7
in vitro differentiated cells
1
primary cell
Organ
42
brain
10
liver
1
epithelium
Project
59
AMP
Genome assembly (visualization)
52
GRCh38
17
hg19
Lab
58
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
tissue
layer of hippocampus
12
caudate nucleus
8
substantia nigra
8
cingulate gyrus
7
middle frontal area 46
7
cell line
HepG2
9
in vitro differentiated cells
neural progenitor cell
7
primary cell
hepatocyte
1
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