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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
255
ChIP-seq
Assay category
255
DNA binding
Target of assay
255
transcription factor
108
histone
108
histone modification
83
control
66
recombinant protein
59
broad histone mark
49
narrow histone mark
38
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
4
June, 2019
1
November, 2019
Available data
251
bigWig
247
bed narrowPeak
244
fastq
243
bam
236
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
3
tar
Organism
255
Homo sapiens
Biosample type
252
cell line
3
primary cell
Organ
252
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
255
AMP
Genome assembly (visualization)
249
hg19
204
GRCh38
Lab
244
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
255 results
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ChIP-seq
cell line
HepG2
252
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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