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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
348
ChIP-seq
15
total RNA-seq
Assay category
348
DNA binding
15
Transcription
Target of assay
244
transcription factor
67
control
66
recombinant protein
37
RNA binding protein
34
histone
34
histone modification
18
narrow histone mark
16
broad histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
359
May, 2021
324
November, 2017
170
February, 2021
148
May, 2020
134
May, 2022
127
August, 2017
110
February, 2023
90
August, 2021
73
September, 2018
72
October, 2019
62
November, 2018
59
September, 2020
55
June, 2019
48
July, 2018
46
December, 2017
43
April, 2018
39
February, 2018
31
July, 2019
28
December, 2018
24
March, 2020
23
January, 2019
21
November, 2019
12
November, 2020
8
January, 2021
7
August, 2020
7
December, 2019
6
January, 2018
5
March, 2023
5
May, 2019
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
Available data
363
fastq
362
bam
308
bigWig
271
bed narrowPeak
255
bigBed narrowPeak
64
bed broadPeak
64
bigBed broadPeak
15
tsv
12
tagAlign
3
tar
Organism
363
Homo sapiens
Biosample type
315
cell line
tissue
39
in vitro differentiated cells
9
primary cell
Organ
315
liver
13
embryo
9
brain
6
epithelium
6
vasculature
3
blood vessel
Project
363
AMP
Genome assembly (visualization)
306
hg19
254
GRCh38
Lab
363
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
23
inconsistent control read length
4
inconsistent control run_type
biosample_type!
tissue
BIOSAMPLE
ASSAY
363 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
315
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
See all biosamples
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