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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
431
ChIP-seq
180
DNase-seq
Assay category
431
DNA binding
180
DNA accessibility
Target of assay
246
transcription factor
105
histone
105
histone modification
77
control
66
recombinant protein
58
broad histone mark
47
narrow histone mark
39
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
649
February, 2021
411
August, 2017
400
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
211
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
96
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
597
bam
531
bigWig
512
bed narrowPeak
511
bigBed narrowPeak
318
fastq
246
bed broadPeak
240
bigBed broadPeak
180
bed bed3+
78
tagAlign
3
tar
Organism
611
Homo sapiens
Biosample type
315
cell line
242
tissue
54
primary cell
Organ
317
liver
121
brain
81
kidney
43
musculature of body
35
heart
32
limb
26
epithelium
18
connective tissue
18
ureter
vasculature
8
blood vessel
7
eye
4
pancreas
2
artery
1
adipose tissue
Project
611
AMP
Genome assembly (visualization)
479
GRCh38
456
hg19
Lab
611
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
vasculature
BIOSAMPLE
ASSAY
611 results
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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
heart
18
muscle of arm
17
caudate nucleus
15
1
substantia nigra
15
+ See 36 more…
primary cell
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
mesenchymal stem cell
7
astrocyte of the cerebellum
3
1
cardiac muscle cell
3
1
+ See 13 more…
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