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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
557
ChIP-seq
187
DNase-seq
Assay category
557
DNA binding
187
DNA accessibility
Target of assay
253
transcription factor
199
histone
199
histone modification
116
broad histone mark
102
control
83
narrow histone mark
66
recombinant protein
46
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
730
bam
641
bigWig
620
bed narrowPeak
619
bigBed narrowPeak
324
fastq
257
bed broadPeak
251
bigBed broadPeak
187
bed bed3+
78
tagAlign
3
tar
Organism
744
Homo sapiens
Biosample type
360
tissue
315
cell line
69
primary cell
Organ
317
liver
149
brain
86
kidney
63
vasculature
58
blood vessel
56
heart
50
musculature of body
39
limb
31
epithelium
18
connective tissue
18
ureter
7
artery
7
eye
6
pancreas
1
adipose tissue
Project
744
AMP
Genome assembly (visualization)
586
GRCh38
565
hg19
Lab
744
AMP-T2D consortium
Audit category:
29
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
744 results
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Clear Filters
ChIP-seq
DNase-seq
tissue
layer of hippocampus
22
muscle of leg
7
13
heart
18
ascending aorta
16
1
muscle of arm
17
+ See 44 more…
cell line
HepG2
315
primary cell
cardiac fibroblast
5
3
skeletal muscle satellite cell
8
mesenchymal stem cell
7
kidney epithelial cell
5
1
astrocyte of the cerebellum
3
1
+ See 17 more…
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