Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
462
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
462
DNA binding
10
DNA accessibility
7
DNA methylation
Target of assay
307
transcription factor
82
recombinant protein
77
control
75
histone
75
histone modification
58
RNA binding protein
46
broad histone mark
29
narrow histone mark
22
chromatin remodeller
5
other context
5
other post-translational modification
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
479
bam
414
bigWig
412
fastq
386
bed narrowPeak
385
bigBed narrowPeak
79
bed broadPeak
78
tagAlign
73
bigBed broadPeak
9
bed bed3+
7
bed bedMethyl
7
bigBed bedMethyl
3
tar
1
csv
Organism
479
Homo sapiens
Biosample type
375
cell line
95
tissue
9
primary cell
Organ
367
liver
80
brain
15
blood
15
bodily fluid
9
spleen
7
pancreas
6
epithelium
6
vasculature
3
blood vessel
1
adipose tissue
1
connective tissue
Project
479
AMP
Genome assembly (visualization)
359
GRCh38
351
hg19
Lab
479
AMP-T2D consortium
Audit category:
13
missing controlled_by
Audit category:
26
inconsistent control read length
8
inconsistent control run_type
month_released!
December, 2017
BIOSAMPLE
ASSAY
479 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
359
1
GM12878
15
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
spleen
6
1
2
+ See 8 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
See all biosamples
Download