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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
400
ChIP-seq
7
ATAC-seq
Assay category
400
DNA binding
7
DNA accessibility
Target of assay
243
transcription factor
81
histone
81
histone modification
73
control
66
recombinant protein
51
broad histone mark
37
RNA binding protein
30
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
407
bam
348
bigWig
341
fastq
325
bed narrowPeak
318
bigBed narrowPeak
92
tagAlign
74
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
407
Homo sapiens
Biosample type
314
cell line
84
tissue
9
primary cell
Organ
314
liver
87
brain
6
epithelium
6
vasculature
4
pancreas
3
blood vessel
1
adipose tissue
1
connective tissue
1
spleen
Project
407
AMP
Genome assembly (visualization)
293
GRCh38
292
hg19
Lab
407
AMP-T2D consortium
Audit category:
13
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
407 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
314
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
brain
8
+ See 5 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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