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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
FAIRE-seq
1
Hi-C
Assay category
46
DNA binding
6
DNA accessibility
1
3D chromatin structure
Target of assay
35
histone
35
histone modification
23
broad histone mark
12
narrow histone mark
9
control
2
RNA binding protein
2
transcription factor
Date released
66
February, 2021
50
May, 2019
47
October, 2019
35
February, 2023
12
July, 2019
7
June, 2019
6
August, 2021
6
November, 2017
4
March, 2020
3
February, 2020
Available data
52
bam
42
bigWig
38
bed narrowPeak
37
bigBed narrowPeak
10
bed broadPeak
10
bigBed broadPeak
6
fastq
4
bed bed3+
1
hic
1
tar
Organism
53
Homo sapiens
Biosample type
27
primary cell
26
tissue
Organ
322
liver
177
brain
69
limb
53
vasculature
50
blood vessel
42
nerve
41
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
53
AMP
Genome assembly (visualization)
43
hg19
37
GRCh38
Lab
53
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein
17
2
1
1
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
tissue
tibial artery
23
2
1
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