Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
ChIP-seq
4
DNase-seq
2
Hi-C
2
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
Assay category
51
DNA binding
6
DNA accessibility
2
3D chromatin structure
2
Transcription
Target of assay
40
histone
40
histone modification
26
broad histone mark
14
narrow histone mark
9
control
2
RNA binding protein
2
transcription factor
Date released
98
August, 2021
66
February, 2021
66
May, 2019
57
April, 2019
55
October, 2019
40
June, 2019
40
May, 2024
36
February, 2023
34
July, 2019
11
March, 2020
6
November, 2017
5
February, 2020
3
May, 2021
Available data
59
bam
49
bigWig
43
bed narrowPeak
37
bigBed narrowPeak
10
bed broadPeak
10
bigBed broadPeak
6
fastq
4
bed bed3+
2
hic
2
tsv
1
bedpe bed3+
1
tar
Organism
61
Homo sapiens
Biosample type
34
tissue
27
primary cell
Organ
322
liver
177
brain
69
limb
53
vasculature
50
blood vessel
42
nerve
41
epithelium
30
kidney
26
artery
21
eye
21
vein
18
pancreas
8
heart
4
connective tissue
4
gonad
4
ovary
2
pituitary gland
1
adipose tissue
1
lymph node
1
skin of body
Project
61
AMP
Genome assembly (visualization)
51
hg19
44
GRCh38
Lab
61
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
61 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
Hi-C
total RNA-seq
ATAC-seq
FAIRE-seq
tissue
tibial artery
23
2
1
heart
5
1
2
primary cell
endothelial cell of umbilical vein
17
2
1
1
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
Download