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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
ChIP-seq
5
ATAC-seq
Assay category
398
DNA binding
5
DNA accessibility
Target of assay
243
transcription factor
77
control
75
histone
75
histone modification
66
recombinant protein
46
broad histone mark
37
RNA binding protein
29
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
403
bam
339
bigWig
335
fastq
318
bed narrowPeak
317
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
2
bed bed3+
Organism
403
Homo sapiens
Biosample type
314
cell line
75
tissue
14
primary cell
Organ
314
liver
78
brain
11
epithelium
11
pancreas
6
vasculature
3
blood vessel
Project
403
AMP
Genome assembly (visualization)
287
GRCh38
287
hg19
Lab
403
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
December, 2018
BIOSAMPLE
ASSAY
403 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
314
tissue
layer of hippocampus
19
caudate nucleus
14
middle frontal area 46
13
substantia nigra
13
cingulate gyrus
8
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
pancreatic alpha cell
2
pancreatic beta cell
2
+ See 1 more…
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