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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
330
ChIP-seq
5
ATAC-seq
Assay category
330
DNA binding
5
DNA accessibility
Target of assay
244
transcription factor
66
recombinant protein
65
control
37
RNA binding protein
18
histone
18
histone modification
15
chromatin remodeller
10
narrow histone mark
8
broad histone mark
2
other context
2
other post-translational modification
Date released
324
November, 2017
287
August, 2017
94
December, 2017
88
November, 2018
76
February, 2023
73
September, 2018
60
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
March, 2019
Available data
403
bam
339
bigWig
335
fastq
318
bed narrowPeak
317
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
2
bed bed3+
Organism
335
Homo sapiens
Biosample type
315
cell line
14
primary cell
6
tissue
Organ
315
liver
11
epithelium
11
pancreas
9
brain
6
vasculature
3
blood vessel
Project
335
AMP
Genome assembly (visualization)
282
hg19
230
GRCh38
Lab
335
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
month_released!
March, 2019
BIOSAMPLE
ASSAY
335 results
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ChIP-seq
ATAC-seq
cell line
HepG2
315
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
pancreatic alpha cell
2
pancreatic beta cell
2
+ See 1 more…
tissue
islet of Langerhans
6
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