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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
346
ChIP-seq
Assay category
346
DNA binding
Target of assay
197
transcription factor
75
control
71
histone
71
histone modification
66
recombinant protein
42
broad histone mark
30
RNA binding protein
29
narrow histone mark
11
chromatin remodeller
1
other context
1
other post-translational modification
Date released
683
February, 2021
373
May, 2021
367
August, 2017
341
May, 2020
340
November, 2017
313
August, 2021
274
October, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
80
April, 2019
79
November, 2018
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
25
June, 2019
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
9
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
392
bam
328
bigWig
324
fastq
309
bed narrowPeak
308
bigBed narrowPeak
78
tagAlign
66
bed broadPeak
bigBed broadPeak
3
tar
2
bed bed3+
Organism
346
Homo sapiens
Biosample type
257
cell line
88
tissue
1
primary cell
Organ
257
liver
85
brain
11
pancreas
epithelium
2
vasculature
1
blood vessel
Project
346
AMP
Genome assembly (visualization)
232
GRCh38
217
hg19
Lab
346
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
organ_slims!
epithelium
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
346 results
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Clear Filters
ChIP-seq
cell line
HepG2
257
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
+ See 2 more…
primary cell
astrocyte of the cerebellum
1
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