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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
14
RRBS
4
Hi-C
3
WGBS
Assay category
25
DNA binding
17
DNA methylation
4
3D chromatin structure
Target of assay
13
histone
13
histone modification
12
control
8
narrow histone mark
5
broad histone mark
Date released
254
August, 2021
202
February, 2023
161
February, 2021
160
May, 2022
106
October, 2019
103
August, 2017
96
May, 2021
57
May, 2020
56
September, 2020
47
September, 2023
42
March, 2020
30
November, 2019
29
October, 2018
25
November, 2017
24
February, 2020
23
May, 2019
21
July, 2019
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
December, 2017
9
October, 2017
8
February, 2018
8
June, 2019
7
November, 2018
6
September, 2017
5
December, 2019
5
March, 2019
5
March, 2023
4
December, 2018
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
153
bam
bigWig
71
bed narrowPeak
66
tagAlign
65
bigBed narrowPeak
58
tsv
22
bed bedMethyl
22
bigBed bedMethyl
12
bed broadPeak
9
fastq
6
bigBed broadPeak
3
bed bed3+
3
hdf5
Organism
46
Homo sapiens
Biosample type
38
tissue
8
primary cell
Organ
liver
27
brain
6
epithelium
5
musculature of body
4
heart
4
kidney
4
limb
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
pericardium
Project
46
AMP
Genome assembly (visualization)
14
hg19
1
GRCh38
Lab
46
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
liver
files.file_type!
bigWig
BIOSAMPLE
ASSAY
46 results
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Clear Filters
ChIP-seq
RRBS
Hi-C
WGBS
tissue
cingulate gyrus
8
layer of hippocampus
6
gastrocnemius medialis
4
substantia nigra
4
caudate nucleus
3
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
+ See 3 more…
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