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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
315
ChIP-seq
1
total RNA-seq
Assay category
315
DNA binding
1
Transcription
Target of assay
241
transcription factor
66
recombinant protein
56
control
34
RNA binding protein
15
chromatin remodeller
15
histone
15
histone modification
8
broad histone mark
7
narrow histone mark
2
other context
2
other post-translational modification
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
315
fastq
314
bam
268
bigWig
249
bed narrowPeak
249
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
12
tagAlign
3
tar
1
tsv
Organism
316
Homo sapiens
Biosample type
315
cell line
1
tissue
Organ
316
liver
103
brain
9
vasculature
6
blood vessel
6
epithelium
3
heart
3
limb
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
nerve
1
pancreas
1
spinal cord
Project
316
AMP
Genome assembly (visualization)
266
hg19
217
GRCh38
Lab
316
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
316 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
315
tissue
right lobe of liver
1
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