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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
315
ChIP-seq
5
total RNA-seq
Assay category
315
DNA binding
5
Transcription
Target of assay
241
transcription factor
66
recombinant protein
56
control
34
RNA binding protein
15
chromatin remodeller
15
histone
15
histone modification
8
broad histone mark
7
narrow histone mark
2
other context
2
other post-translational modification
Date released
315
November, 2017
194
May, 2020
63
December, 2017
54
August, 2017
53
November, 2018
40
May, 2022
35
August, 2021
10
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
February, 2021
3
March, 2020
2
June, 2019
1
December, 2018
1
February, 2020
Available data
320
fastq
319
bam
273
bigWig
249
bed narrowPeak
249
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
12
tagAlign
5
tsv
3
tar
Organism
320
Homo sapiens
Biosample type
320
cell line
Organ
320
liver
91
brain
18
blood
18
bodily fluid
7
spleen
6
epithelium
6
vasculature
3
blood vessel
Project
320
AMP
Genome assembly (visualization)
271
hg19
222
GRCh38
Lab
320
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
320 results
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ChIP-seq
total RNA-seq
cell line
HepG2
315
5
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