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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
319
ChIP-seq
Assay category
319
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
broad histone mark
38
narrow histone mark
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
341
May, 2020
319
November, 2017
318
May, 2021
309
August, 2021
294
August, 2017
259
October, 2019
206
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
75
December, 2017
67
November, 2018
64
March, 2020
59
September, 2020
57
May, 2019
56
September, 2018
54
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
39
April, 2019
33
December, 2018
31
February, 2018
25
February, 2020
20
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
309
bam
279
fastq
254
bigWig
233
bed narrowPeak
232
bigBed narrowPeak
53
bed broadPeak
49
bigBed broadPeak
37
tagAlign
2
tar
Organism
319
Homo sapiens
Biosample type
273
cell line
40
tissue
6
primary cell
Organ
273
liver
46
brain
4
epithelium
4
vasculature
2
blood vessel
Project
319
AMP
Genome assembly (visualization)
237
hg19
204
GRCh38
Lab
319
AMP-T2D consortium
Audit category:
8
missing controlled_by
Audit category:
10
inconsistent control read length
2
inconsistent control run_type
target.investigated_as!
broad histone mark
RNA binding protein
BIOSAMPLE
ASSAY
319 results
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Clear Filters
ChIP-seq
cell line
HepG2
273
tissue
layer of hippocampus
10
caudate nucleus
7
cingulate gyrus
7
middle frontal area 46
7
substantia nigra
7
+ See 1 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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