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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
330
ChIP-seq
187
DNase-seq
Assay category
330
DNA binding
187
DNA accessibility
Target of assay
248
transcription factor
107
histone
histone modification
79
control
66
recombinant protein
58
broad histone mark
49
narrow histone mark
41
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
318
November, 2017
314
May, 2020
299
August, 2021
259
May, 2021
212
August, 2017
205
February, 2023
200
May, 2022
199
June, 2019
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
516
bam
450
bigWig
430
bed narrowPeak
430
bigBed narrowPeak
306
fastq
234
bed broadPeak
234
bigBed broadPeak
187
bed bed3+
11
tagAlign
3
tar
Organism
517
Homo sapiens
Biosample type
300
cell line
175
tissue
42
primary cell
Organ
302
liver
80
kidney
48
brain
35
musculature of body
33
heart
32
limb
22
epithelium
18
ureter
11
vasculature
10
connective tissue
7
blood vessel
6
eye
4
pancreas
2
artery
1
adipose tissue
Project
517
AMP
Genome assembly (visualization)
425
hg19
398
GRCh38
Lab
517
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
517 results
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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
300
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 38 more…
primary cell
cardiac fibroblast
3
3
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
cardiac muscle cell
2
1
choroid plexus epithelial cell
2
1
+ See 17 more…
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