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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
26
ATAC-seq
2
Hi-C
Assay category
74
DNA binding
26
DNA accessibility
2
3D chromatin structure
Target of assay
57
control
13
histone
13
histone modification
8
narrow histone mark
5
broad histone mark
4
transcription factor
2
RNA binding protein
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
449
bam
bigWig
348
bed narrowPeak
322
fastq
310
bigBed narrowPeak
78
tagAlign
69
bed broadPeak
63
bigBed broadPeak
20
tsv
3
tar
2
bedpe bed3+
2
hic
Organism
102
Homo sapiens
Biosample type
51
cell line
46
tissue
5
in vitro differentiated cells
Organ
47
liver
25
brain
24
pancreas
4
epithelium
1
adipose tissue
1
connective tissue
Project
102
AMP
Genome assembly (visualization)
28
hg19
27
GRCh38
Lab
102
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
target.investigated_as!
other context
files.file_type!
bigWig
BIOSAMPLE
ASSAY
102 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
cell line
HepG2
47
EndoC_BH1
2
1
1
tissue
islet of Langerhans
19
1
cingulate gyrus
8
layer of hippocampus
6
substantia nigra
4
caudate nucleus
3
+ See 3 more…
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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