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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
242
ChIP-seq
Assay category
242
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
other post-translational modification
Date released
242
November, 2017
61
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
14
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
4
June, 2019
1
November, 2019
Available data
242
fastq
241
bam
238
bigWig
234
bed narrowPeak
234
bigBed narrowPeak
46
bed broadPeak
46
bigBed broadPeak
3
tar
Organism
242
Homo sapiens
Biosample type
239
cell line
3
primary cell
Organ
239
liver
3
brain
2
epithelium
2
vasculature
1
blood vessel
Project
242
AMP
Genome assembly (visualization)
236
hg19
202
GRCh38
Lab
242
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
242 results
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ChIP-seq
cell line
HepG2
239
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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