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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
246
ChIP-seq
Assay category
246
DNA binding
Target of assay
236
transcription factor
73
histone
73
histone modification
recombinant protein
45
broad histone mark
35
RNA binding protein
28
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
246
November, 2017
210
June, 2019
97
May, 2019
70
October, 2019
64
April, 2019
58
November, 2018
50
December, 2017
45
October, 2018
42
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
326
bam
268
bigWig
258
fastq
247
bed narrowPeak
246
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
246
Homo sapiens
Biosample type
183
cell line
57
tissue
6
primary cell
Organ
183
liver
63
brain
4
epithelium
4
vasculature
2
blood vessel
Project
246
AMP
Genome assembly (visualization)
214
GRCh38
193
hg19
Lab
246
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
18
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
246 results
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ChIP-seq
cell line
HepG2
183
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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