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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
214
ChIP-seq
Assay category
214
DNA binding
Target of assay
204
transcription factor
73
histone
73
histone modification
recombinant protein
45
broad histone mark
31
RNA binding protein
28
narrow histone mark
13
chromatin remodeller
2
other context
2
other post-translational modification
Date released
214
November, 2017
210
June, 2019
96
May, 2019
66
October, 2019
64
April, 2019
57
November, 2018
50
December, 2017
45
October, 2018
38
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
1
November, 2020
Available data
214
bam
214
bed narrowPeak
214
bigBed narrowPeak
213
bigWig
157
fastq
55
bed broadPeak
54
tagAlign
50
bigBed broadPeak
Organism
214
Homo sapiens
Biosample type
151
cell line
57
tissue
6
primary cell
Organ
151
liver
63
brain
4
epithelium
4
vasculature
2
blood vessel
Project
214
AMP
Genome assembly (visualization)
214
GRCh38
193
hg19
Lab
214
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
16
inconsistent control read length
2
inconsistent control run_type
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
214 results
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ChIP-seq
cell line
HepG2
151
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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