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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
334
ChIP-seq
10
single cell RNA-seq
6
total RNA-seq
Assay category
334
DNA binding
16
Transcription
Target of assay
242
transcription factor
86
histone
86
histone modification
69
control
recombinant protein
50
broad histone mark
36
narrow histone mark
35
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
683
February, 2021
382
August, 2017
373
May, 2021
341
May, 2020
334
November, 2017
313
August, 2021
272
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
80
April, 2019
75
December, 2017
74
October, 2018
72
November, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
336
bam
278
bigWig
267
fastq
243
bed narrowPeak
242
bigBed narrowPeak
78
tagAlign
66
bed broadPeak
60
bigBed broadPeak
16
tsv
3
tar
Organism
350
Homo sapiens
Biosample type
249
cell line
88
tissue
13
primary cell
Organ
249
liver
91
brain
epithelium
39
pancreas
6
vasculature
3
blood vessel
2
connective tissue
Project
350
AMP
Genome assembly (visualization)
226
GRCh38
226
hg19
Lab
350
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
20
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
recombinant protein
organ_slims!
epithelium
BIOSAMPLE
ASSAY
350 results
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Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
cell line
HepG2
249
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
+ See 2 more…
primary cell
mesenchymal cell
5
astrocyte of the cerebellum
3
pancreatic cell
3
pancreatic stellate cell
2
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