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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
Assay category
41
DNA binding
Target of assay
286
transcription factor
119
histone
119
histone modification
92
control
66
recombinant protein
65
broad histone mark
54
narrow histone mark
41
RNA binding protein
18
chromatin remodeller
2
other context
2
other post-translational modification
Date released
37
November, 2017
21
November, 2018
11
October, 2018
8
August, 2017
6
January, 2019
5
May, 2019
5
May, 2021
4
April, 2019
4
December, 2017
4
June, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
41
bam
41
fastq
39
bed narrowPeak
39
bigBed narrowPeak
39
bigWig
7
bed broadPeak
7
bigBed broadPeak
1
tar
Organism
41
Homo sapiens
Biosample type
34
cell line
3
primary cell
2
in vitro differentiated cells
2
tissue
Organ
38
liver
4
epithelium
3
brain
2
vasculature
1
blood vessel
Project
41
AMP
Genome assembly (visualization)
38
hg19
35
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent control run_type
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
cell line
HepG2
34
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
in vitro differentiated cells
hepatocyte
2
tissue
liver
1
right lobe of liver
1
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