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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
Assay category
39
DNA binding
Target of assay
269
transcription factor
90
histone
90
histone modification
66
recombinant protein
55
broad histone mark
39
RNA binding protein
35
narrow histone mark
18
chromatin remodeller
2
other context
2
other post-translational modification
Date released
35
November, 2017
21
November, 2018
11
October, 2018
6
January, 2019
5
May, 2019
4
December, 2017
4
June, 2019
3
April, 2019
2
August, 2017
2
December, 2018
Available data
41
bam
41
fastq
39
bed narrowPeak
39
bigBed narrowPeak
39
bigWig
7
bed broadPeak
7
bigBed broadPeak
1
tar
Organism
39
Homo sapiens
Biosample type
32
cell line
3
primary cell
2
in vitro differentiated cells
2
tissue
Organ
36
liver
4
epithelium
3
brain
2
vasculature
1
blood vessel
Project
39
AMP
Genome assembly (visualization)
38
hg19
35
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
2
inconsistent control run_type
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
cell line
HepG2
32
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
in vitro differentiated cells
hepatocyte
2
tissue
liver
1
right lobe of liver
1
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