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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
Assay category
121
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
159
August, 2017
121
November, 2017
94
October, 2019
85
May, 2021
81
May, 2019
51
April, 2019
48
October, 2018
36
December, 2017
23
May, 2020
21
August, 2021
17
September, 2018
16
February, 2018
16
June, 2019
13
October, 2017
8
January, 2019
8
November, 2019
6
November, 2018
6
September, 2017
5
November, 2020
4
December, 2018
3
February, 2021
3
July, 2019
Available data
117
bam
67
fastq
61
bigWig
52
tagAlign
45
bed narrowPeak
45
bigBed narrowPeak
10
bed broadPeak
8
bigBed broadPeak
Organism
121
Homo sapiens
Biosample type
64
cell line
54
tissue
3
primary cell
Organ
64
liver
57
brain
2
epithelium
2
vasculature
1
blood vessel
Project
121
AMP
Genome assembly (visualization)
45
GRCh38
26
hg19
Lab
121
AMP-T2D consortium
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
121 results
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Clear Filters
ChIP-seq
cell line
HepG2
64
tissue
layer of hippocampus
15
caudate nucleus
10
substantia nigra
10
cingulate gyrus
9
middle frontal area 46
9
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primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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