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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
Assay category
86
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
86
November, 2017
53
August, 2017
39
October, 2019
29
October, 2018
24
December, 2017
23
May, 2019
23
May, 2020
14
April, 2019
13
November, 2018
12
August, 2021
10
January, 2019
9
May, 2021
8
February, 2018
8
June, 2019
6
December, 2018
6
September, 2017
5
November, 2020
3
February, 2021
3
July, 2019
3
October, 2017
2
November, 2019
Available data
86
bam
74
fastq
31
bigWig
15
bed narrowPeak
15
bigBed narrowPeak
11
tagAlign
4
bed broadPeak
4
bigBed broadPeak
Organism
86
Homo sapiens
Biosample type
71
cell line
12
tissue
3
primary cell
Organ
71
liver
15
brain
2
epithelium
2
vasculature
1
blood vessel
Project
86
AMP
Genome assembly (visualization)
31
hg19
13
GRCh38
Lab
86
AMP-T2D consortium
Audit category:
4
missing controlled_by
Audit category:
6
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
cell line
HepG2
71
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
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primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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