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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
315
ChIP-seq
Assay category
315
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
315
November, 2017
97
August, 2017
70
November, 2018
63
December, 2017
46
October, 2019
44
October, 2018
32
December, 2018
28
May, 2019
25
May, 2021
23
August, 2021
23
May, 2020
20
April, 2019
18
January, 2019
12
June, 2019
8
February, 2018
8
February, 2021
6
September, 2017
5
November, 2020
3
July, 2019
3
November, 2019
3
October, 2017
Available data
314
bam
303
fastq
256
bigWig
236
bed narrowPeak
236
bigBed narrowPeak
47
bed broadPeak
47
bigBed broadPeak
11
tagAlign
3
tar
Organism
315
Homo sapiens
Biosample type
297
cell line
12
tissue
6
primary cell
Organ
297
liver
18
brain
4
epithelium
4
vasculature
2
blood vessel
Project
315
AMP
Genome assembly (visualization)
254
hg19
204
GRCh38
Lab
315
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
315 results
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Clear Filters
ChIP-seq
cell line
HepG2
297
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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