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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
1
FAIRE-seq
1
single cell RNA-seq
Assay category
49
DNA binding
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
64
transcription factor
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
709
February, 2021
393
May, 2021
349
August, 2017
341
May, 2020
318
August, 2021
306
November, 2017
305
October, 2019
205
February, 2023
168
July, 2018
159
May, 2022
115
May, 2019
90
December, 2017
81
July, 2019
76
April, 2019
73
September, 2018
65
October, 2018
64
March, 2020
60
November, 2019
59
September, 2020
51
November, 2018
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
27
June, 2019
25
February, 2020
24
January, 2019
19
April, 2020
19
October, 2017
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
60
fastq
59
bam
52
bed narrowPeak
52
bigBed narrowPeak
52
bigWig
9
bed bed3+
bed broadPeak
9
bigBed broadPeak
1
csv
Organism
51
Homo sapiens
Biosample type
39
cell line
11
tissue
1
primary cell
Organ
30
liver
13
blood
13
bodily fluid
6
spleen
1
pancreas
Project
51
AMP
Genome assembly (visualization)
42
GRCh38
41
hg19
Lab
51
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
assay_slims!
DNA methylation
target.investigated_as!
RNA binding protein
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ChIP-seq
FAIRE-seq
single cell RNA-seq
cell line
HepG2
26
GM12878
13
tissue
spleen
6
liver
4
pancreas
1
primary cell
pancreatic cell
1
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