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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
89
total RNA-seq
4
WGBS
3
ATAC-seq
DNase-seq
2
FAIRE-seq
Assay category
94
DNA binding
89
Transcription
5
DNA accessibility
4
DNA methylation
Target of assay
66
histone
66
histone modification
34
narrow histone mark
32
broad histone mark
21
control
7
transcription factor
2
RNA binding protein
Date released
187
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
17
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
6
July, 2019
5
March, 2019
5
November, 2018
5
October, 2017
4
August, 2021
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
172
bam
172
fastq
163
bigWig
89
tsv
49
bed narrowPeak
19
bed bed3+
17
bigBed narrowPeak
16
tagAlign
12
bed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
Organism
185
Homo sapiens
Biosample type
151
tissue
41
primary cell
Organ
192
pancreas
124
connective tissue
103
liver
57
adipose tissue
29
epithelium
26
musculature of body
15
blood
15
bodily fluid
8
spleen
Project
192
AMP
Genome assembly (visualization)
159
hg19
155
GRCh38
Lab
192
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
8
inconsistent control read length
1
inconsistent assembly
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
192 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
ATAC-seq
FAIRE-seq
tissue
islet of Langerhans
42
89
1
pancreas
14
2
1
body of pancreas
2
primary cell
pancreatic alpha cell
13
1
pancreatic beta cell
13
1
pancreatic endocrine cell
12
pancreatic acinar cell
1
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