Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
8
DNase-seq
7
WGBS
1
FAIRE-seq
single cell RNA-seq
Assay category
66
DNA binding
9
DNA accessibility
7
DNA methylation
Target of assay
60
transcription factor
20
RNA binding protein
16
recombinant protein
6
control
3
chromatin remodeller
3
other context
3
other post-translational modification
Date released
402
November, 2017
397
May, 2021
341
May, 2020
310
October, 2019
285
August, 2017
242
February, 2021
208
August, 2021
200
June, 2019
190
February, 2023
166
May, 2022
120
July, 2018
120
May, 2019
94
December, 2017
87
July, 2019
82
November, 2018
80
April, 2019
72
September, 2018
62
March, 2020
60
November, 2019
53
October, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
September, 2020
16
January, 2021
11
May, 2023
11
September, 2017
10
April, 2020
10
November, 2020
7
August, 2020
7
December, 2019
7
January, 2018
6
April, 2018
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2022
Available data
82
bam
82
fastq
75
bigWig
68
bed narrowPeak
68
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
82
Homo sapiens
Biosample type
57
cell line
25
tissue
Organ
49
liver
15
blood
15
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
connective tissue
Project
82
AMP
Genome assembly (visualization)
74
GRCh38
66
hg19
Lab
82
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
inconsistent control run_type
assay_title!
single cell RNA-seq
audit.WARNING.category!
inconsistent control run_type
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
82 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
41
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
+ See 1 more…
See all biosamples
Download