Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
DNase-seq
10
MeRIP-seq
7
WGBS
4
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
single cell RNA-seq
Assay category
DNA binding
12
DNA accessibility
7
DNA methylation
4
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
689
February, 2021
291
May, 2020
234
May, 2021
204
February, 2023
187
June, 2019
170
August, 2021
166
May, 2022
120
July, 2018
115
August, 2017
105
July, 2019
72
October, 2019
61
March, 2020
48
November, 2019
40
September, 2018
25
February, 2020
19
September, 2020
17
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
12
May, 2023
10
April, 2020
8
January, 2018
8
October, 2017
7
August, 2020
7
December, 2019
6
April, 2018
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
October, 2022
2
October, 2018
1
August, 2018
1
August, 2022
1
December, 2018
Available data
23
bam
22
bigWig
17
fastq
12
bed narrowPeak
11
bigBed narrowPeak
10
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
4
tsv
Organism
33
Homo sapiens
Biosample type
20
tissue
7
cell line
6
primary cell
Organ
17
pancreas
7
connective tissue
6
epithelium
4
liver
3
spleen
2
brain
1
adipose tissue
Project
33
AMP
Genome assembly (visualization)
22
GRCh38
16
hg19
Lab
23
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
assay_title!
single cell RNA-seq
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
33 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
MeRIP-seq
WGBS
total RNA-seq
ATAC-seq
FAIRE-seq
tissue
body of pancreas
2
2
islet of Langerhans
4
pancreas
2
1
spleen
1
2
brain
2
+ See 3 more…
cell line
EndoC_BH1
6
HepG2
1
primary cell
osteoblast
1
4
1
See all biosamples
Download