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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
196
DNase-seq
86
ChIP-seq
1
FAIRE-seq
Assay category
86
DNA binding
Target of assay
67
transcription factor
25
RNA binding protein
19
histone
19
histone modification
15
recombinant protein
11
narrow histone mark
8
broad histone mark
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
313
November, 2017
174
October, 2019
132
August, 2017
120
May, 2021
97
May, 2019
72
December, 2017
65
April, 2019
63
November, 2018
45
October, 2018
40
May, 2024
32
September, 2018
30
August, 2021
30
December, 2018
27
May, 2020
23
June, 2019
21
January, 2019
16
February, 2018
11
November, 2019
6
October, 2017
5
February, 2021
3
March, 2020
Available data
101
bam
86
bed narrowPeak
86
bigBed narrowPeak
86
bigWig
70
fastq
Organism
86
Homo sapiens
Biosample type
56
cell line
23
primary cell
7
tissue
Organ
48
liver
12
blood
12
bodily fluid
9
connective tissue
8
musculature of body
4
epithelium
3
heart
3
spleen
2
eye
2
kidney
Project
86
AMP
Genome assembly (visualization)
86
GRCh38
84
hg19
Lab
86
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
86 results
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ChIP-seq
cell line
HepG2
44
GM12878
12
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
3
cardiac muscle cell
2
epithelial cell of proximal tubule
2
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tissue
liver
4
spleen
3
See all biosamples
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