Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
3
Hi-C
1
MPRA
1
single cell RNA-seq
Assay category
7
DNA binding
3
3D chromatin structure
1
Transcription
Target of assay
6
control
1
recombinant protein
1
transcription factor
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
88
fastq
87
bam
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
3
bedpe bed3+
3
cool
3
hic
1
csv
1
txt
Organism
11
Homo sapiens
Biosample type
5
cell line
4
primary cell
3
tissue
Organ
3
blood
3
bodily fluid
3
epithelium
3
pancreas
3
spleen
1
liver
Project
9
AMP
3
HPAP
Genome assembly (visualization)
3
hg19
Lab
9
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
Audit category:
1
missing controlled_by
files.file_type!
bigWig
bigBed broadPeak
BIOSAMPLE
ASSAY
12 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
Hi-C
MPRA
single cell RNA-seq
cell line
GM12878
3
HepG2
1
MIN6
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic cell
1
tissue
spleen
3
Download