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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
4
ATAC-seq
1
Hi-C
1
single cell RNA-seq
Assay category
7
DNA binding
4
DNA accessibility
1
3D chromatin structure
1
Transcription
Target of assay
6
control
1
recombinant protein
1
transcription factor
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
89
fastq
88
bam
bigWig
73
bed narrowPeak
73
bigBed narrowPeak
10
bed broadPeak
9
bed bed3+
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
bedpe
1
csv
1
hic
Organism
13
Homo sapiens
Biosample type
8
tissue
4
cell line
1
primary cell
Organ
5
pancreas
3
blood
3
bodily fluid
3
spleen
1
liver
Project
13
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
8
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
1
missing controlled_by
files.file_type!
bigWig
BIOSAMPLE
ASSAY
13 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
single cell RNA-seq
tissue
islet of Langerhans
4
1
spleen
3
cell line
GM12878
3
HepG2
1
primary cell
pancreatic cell
1
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